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STRINGSTRING
EDP05237 EDP05237 EDP08956 EDP08956 EDP04208 EDP04208 EDP03310 EDP03310 NEP1 NEP1 EDP01097 EDP01097 EDP07045 EDP07045
"EDP03310" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP03310Predicted protein (99 aa)    
Predicted Functional Partners:
EDP08956
Predicted protein (64 aa)
     
        0.521
EDP01097
Predicted protein (181 aa)
     
        0.477
NEP1
pre-rRNA processing protein (230 aa)
     
        0.475
EDP04208
Predicted protein (86 aa)
     
        0.467
EDP05237
Hypothetical protein (144 aa)
     
        0.433
EDP07045
Predicted protein (285 aa)
     
        0.428
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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