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RPB2 RPB2 EDP07113 EDP07113 RPB6 RPB6 EDP05450 EDP05450 EDP03332 EDP03332 RPB10 RPB10 rpoB-1 rpoB-1 RPC19 RPC19 RPA12 RPA12 RPA1 RPA1 EDP02864 EDP02864
"EDP03332" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
EDP03332Predicted protein (263 aa)    
Predicted Functional Partners:
EDP07113
Predicted protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (720 aa)
     
  0.913
RPA1
DNA-directed RNA polymerase I subunit A; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1515 aa)
     
  0.861
RPC19
RNA polymerase subunit (99 aa)
       
  0.716
RPA12
DNA-directed RNA polymerase I subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (124 aa)
     
 
  0.703
RPB10
DNA-directed RNA polymerases I/II/III subunit (79 aa)
     
 
  0.696
EDP05450
Global transcription factor (325 aa)
       
  0.690
RPB6
Subunit of DNA-directed RNA polymerase (87 aa)
         
  0.684
RPB2
DNA-directed RNA polymerase II, 135 kDa polypeptide; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1634 aa)
     
  0.636
EDP02864
DNA-directed RNA polymerase III, subunit 2; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1161 aa)
     
  0.632
rpoB-1
RNA polymerase beta subunit I; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (822 aa)
     
  0.616
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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