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STRINGSTRING
EDO97893 EDO97893 ATF1 ATF1 CMPS1 CMPS1 AAT1 AAT1 GSN1 GSN1 GLN3 GLN3 GSF1 GSF1 GDH2 GDH2 GDH1 GDH1 NII1 NII1 ALD1 ALD1
"GLN3" - Glutamine synthetase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLN3Glutamine synthetase (375 aa)    
Predicted Functional Partners:
GSN1
Glutamate synthase, NADH-dependent (2201 aa)
   
 
  0.996
GSF1
Ferredoxin-dependent glutamate synthase (1552 aa)
   
 
  0.996
NII1
Nitrite reductase (589 aa)
         
  0.983
GDH1
Glutamate dehydrogenase (448 aa)
   
 
  0.983
GDH2
Glutamate dehydrogenase (450 aa)
   
 
  0.983
AAT1
Alanine aminotransferase (521 aa)
   
  0.938
EDO97893
Predicted protein (278 aa)
   
 
  0.938
CMPS1
Carbamoyl phosphate synthase, small subunit (461 aa)
   
 
  0.932
ATF1
Glucosamine--fructose-6-phosphate aminotransferase (679 aa)
   
 
  0.932
ALD1
Aldehyde dehydrogenase (548 aa)
   
 
  0.931
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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