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EDP01097 EDP01097 EDP07550 EDP07550 EDP03968 EDP03968 EDP06418 EDP06418 PUF1 PUF1 EDP07224 EDP07224 EDP09248 EDP09248 NHP2 NHP2 EDP03582 EDP03582 FKB16-3 FKB16-3 EDP02318 EDP02318
"FKB16-3" - Peptidyl-prolyl cis-trans isomerase, FKBP-type in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FKB16-3Peptidyl-prolyl cis-trans isomerase, FKBP-type (208 aa)    
Predicted Functional Partners:
EDP06418
Predicted protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (634 aa)
     
      0.939
EDP07550
Predicted protein (281 aa)
     
      0.929
EDP03582
Predicted protein (380 aa)
     
      0.913
NHP2
Nucleolar protein, small subunit of H/ACA snoRNPs (162 aa)
     
      0.897
EDP07224
Predicted protein (286 aa)
     
      0.896
EDP02318
Predicted protein (1017 aa)
     
      0.886
EDP03968
Predicted protein (319 aa)
     
      0.878
EDP01097
Predicted protein (181 aa)
     
      0.862
EDP09248
Predicted protein (211 aa)
     
 
  0.857
PUF1
Puf protein (717 aa)
     
      0.851
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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