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GSN1 GSN1 PYR5 PYR5 SPC22 SPC22 GSF1 GSF1 IMP2 IMP2 TPP1 TPP1 LPA1 LPA1 EDP06262 EDP06262 SECY1 SECY1 EDP00260 EDP00260 PRPL3 PRPL3
"TPP1" - Chloroplast thylakoid processing peptidase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPP1Chloroplast thylakoid processing peptidase (313 aa)    
Predicted Functional Partners:
SPC22
Signal peptidase, 22 kDa subunit (168 aa)
     
  0.728
PYR5
Uridine 5’-monophosphate synthase (474 aa)
   
   
  0.659
IMP2
Mitochondrial inner membrane signal peptidase (173 aa)
   
 
 
  0.621
PRPL3
Plastid ribosomal protein L3 (259 aa)
     
 
  0.608
SECY1
Preprotein translocase secY subunit (451 aa)
   
 
  0.604
EDP06262
Predicted protein (1097 aa)
   
        0.588
GSN1
Glutamate synthase, NADH-dependent (2201 aa)
   
   
  0.586
LPA1
Membrane GTP-binding protein LepA (579 aa)
   
   
  0.578
EDP00260
Chloroplast SRP54 subunit of signal recognition particle (549 aa)
   
   
  0.577
GSF1
Ferredoxin-dependent glutamate synthase (1552 aa)
   
   
  0.577
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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