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STRINGSTRING
EDP03172 EDP03172 EDP03171 EDP03171 BOR1 BOR1 155027p 155027p EDP03713 EDP03713 EDO95971 EDO95971 UBC8 UBC8 EDP00702 EDP00702 EDP04793 EDP04793 EDP00339 EDP00339 EDP07467 EDP07467
"EDP04793" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP04793Predicted protein (424 aa)    
Predicted Functional Partners:
EDP03171
Predicted protein (1237 aa)
     
        0.506
EDP00339
Predicted protein (466 aa)
     
        0.506
EDP00702
Predicted protein (1194 aa)
     
        0.504
155027p
Hypothetical protein (145 aa)
     
        0.500
EDP03713
Predicted protein (475 aa)
     
        0.480
EDO95971
Predicted protein (129 aa)
     
        0.480
EDP07467
Predicted protein (523 aa)
     
        0.475
EDP03172
Predicted protein (484 aa)
     
        0.475
UBC8
Ubiquitin-protein ligase (1258 aa)
     
        0.475
BOR1
Borate transporter (497 aa)
     
        0.451
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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