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PIK1 PIK1 VPS34 VPS34 TOP2 TOP2 EDP09315 EDP09315 EDP05135 EDP05135 ATR1 ATR1 SMG1 SMG1 EDP03175 EDP03175 SET4 SET4 TOR1 TOR1 EDP06932 EDP06932
"EDP05135" - SNF2 superfamily protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP05135SNF2 superfamily protein (1610 aa)    
Predicted Functional Partners:
TOP2
DNA topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1167 aa)
     
  0.976
SMG1
Phosphatidylinositol 3-kinase-related protein kinase (4881 aa)
     
  0.970
TOR1
Target of rapamycin, growth-regulatory PI3K-like protein kinase (1696 aa)
     
  0.970
ATR1
DNA damage-sensing protein kinase (3304 aa)
     
  0.969
EDP06932
ATM/ATR-like kinase (4723 aa)
     
  0.967
VPS34
VPS34-like PI-3-kinase (1098 aa)
     
  0.966
SET4
Histone methyltransferase (2983 aa)
     
  0.965
EDP09315
High mobility group protein (552 aa)
     
  0.965
PIK1
Phosphatidylinositol 4-kinase (589 aa)
     
  0.964
EDP03175
Histone methyltransferase (1708 aa)
     
  0.962
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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