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STRINGSTRING
EDP01184 EDP01184 EDP08334 EDP08334 VPS20 VPS20 EDP07348 EDP07348 EDP06018 EDP06018 CGL60 CGL60 EDP09344 EDP09344 VSR1 VSR1 EDP04402 EDP04402 CYG41 CYG41 EDP08060 EDP08060
"EDP06018" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06018Predicted protein (778 aa)    
Predicted Functional Partners:
CGL60
Predicted protein (457 aa)
     
        0.652
EDP01184
Predicted protein (494 aa)
     
        0.628
CYG41
Guanylate cyclase (710 aa)
     
        0.608
VPS20
Subunit of ESCRT-III complex (232 aa)
     
        0.592
EDP04402
Predicted protein (517 aa)
     
        0.590
EDP08334
Serine/threonine protein phosphatase (398 aa)
     
        0.521
EDP08060
Predicted protein (455 aa)
     
        0.514
VSR1
Vacuolar sorting receptor (700 aa)
     
        0.505
EDP07348
Predicted protein (756 aa)
     
        0.504
EDP09344
Metal ion transporter (751 aa)
     
        0.502
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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