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STRINGSTRING
COPT1 COPT1 CTH1|CTH1B CTH1|CTH1B CRD1 CRD1 CTR3 CTR3 ZIP1 ZIP1 CPX1 CPX1 CYC6 CYC6 FRE1 FRE1 CYC1 CYC1
"CTR3" - Copper transport accessory protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTR3Copper transport accessory protein (721 aa)    
Predicted Functional Partners:
COPT1
CTR type copper ion transporter (241 aa)
           
  0.579
ZIP1
ZIP family transporter (413 aa)
           
  0.572
FRE1
Ferric-chelate reductase/ oxidoreductase (1087 aa)
           
  0.473
CPX1
Coproporphyrinogen III oxidase (365 aa)
           
  0.471
CRD1
Copper response defect 1 protein (407 aa)
           
  0.465
CYC6
Cytochrome c6 (148 aa)
           
  0.465
CYC1
Ubiquinol-cytochrome c oxidoreductase cytochrome c1 (314 aa)
           
  0.465
CTH1|CTH1B
Copper target 1 protein (407 aa)
           
  0.463
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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