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STRINGSTRING
EDP07254 EDP07254 EDP06496 EDP06496 EDP04827 EDP04827 EDP02421 EDP02421 EDP08677 EDP08677 EDP07456 EDP07456 EDP09686 EDP09686 EDP04698 EDP04698 EDP00047 EDP00047 EDP04331 EDP04331 EDO99294 EDO99294
"EDP06496" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06496Predicted protein (219 aa)    
Predicted Functional Partners:
EDP08677
Predicted protein (1660 aa)
     
        0.504
EDP04331
Histone acetyltransferase, type b catalytic subunit (444 aa)
     
        0.478
EDP00047
Predicted protein (379 aa)
     
        0.476
EDP04827
Predicted protein (2304 aa)
     
        0.475
EDP04698
High mobility group protein (200 aa)
     
        0.475
EDP07456
Predicted protein (308 aa)
     
        0.451
EDO99294
Predicted protein (479 aa)
     
        0.422
EDP07254
Predicted protein (3707 aa)
     
        0.418
EDP02421
Predicted protein (1653 aa)
     
        0.416
EDP09686
Predicted protein (1846 aa)
     
        0.408
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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