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PUF2 PUF2 LSM1 LSM1 EDO98824 EDO98824 LSM2 LSM2 EDP06543 EDP06543 EDP04639 EDP04639 CBF5 CBF5 EDP05831 EDP05831 EDO98311 EDO98311 EDO98399 EDO98399 EDP04789 EDP04789
"EDP06543" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06543Predicted protein (179 aa)    
Predicted Functional Partners:
EDO98311
Predicted protein (1716 aa)
     
 
  0.908
EDP04789
Predicted protein (1372 aa)
       
 
  0.906
EDP04639
Predicted protein (2497 aa)
       
 
  0.906
EDO98399
Predicted protein (1238 aa)
       
 
  0.906
EDP05831
Predicted protein (156 aa)
     
      0.694
LSM2
Sm-D1 protein (93 aa)
     
 
  0.486
PUF2
Puf protein (314 aa)
       
 
  0.482
LSM1
Sm protein LSm1 (126 aa)
     
 
  0.471
CBF5
Centromere/microtubule binding protein (435 aa)
       
      0.451
EDO98824
Predicted protein (207 aa)
       
      0.451
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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