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STRINGSTRING
EDP09941 EDP09941 EIF5Ba EIF5Ba EDO99187 EDO99187 EDP06926 EDP06926 EDP02085 EDP02085 EDP06649 EDP06649 EDO98975 EDO98975 EDO99518 EDO99518 EDO98976 EDO98976 EDP01065 EDP01065 EDP01392 EDP01392
"EDP06649" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06649Predicted protein (353 aa)    
Predicted Functional Partners:
EDP06926
Predicted protein (796 aa)
   
  0.998
EDO98975
Predicted protein (253 aa)
   
  0.997
EIF5Ba
Eukaryotic initiation factor (1651 aa)
   
  0.996
EDP02085
Predicted protein (499 aa)
   
0.996
EDP09941
Predicted protein (161 aa)
   
  0.991
EDP01392
Predicted protein (301 aa)
   
  0.991
EDP01065
Predicted protein (100 aa)
   
  0.991
EDO98976
Predicted protein (116 aa)
   
  0.987
EDO99187
isoleucyl-tRNA synthetase (902 aa)
   
 
  0.964
EDO99518
Predicted protein (1177 aa)
   
 
  0.963
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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