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CHLM CHLM COQ3 COQ3 ZEP1 ZEP1 EDO96144 EDO96144 CHYB CHYB CYP97A5 CYP97A5 LCYE LCYE CYP97A6 CYP97A6 IDI1 IDI1 PSY PSY EDO99516 EDO99516
"ZEP1" - Zeaxanthin epoxidase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZEP1Zeaxanthin epoxidase (763 aa)    
Predicted Functional Partners:
CHYB
Beta-carotene hydroxylase (297 aa)
     
 
  0.943
CYP97A6
Cytochrome P450, carotenoid hydroxylase (655 aa)
     
  0.939
CYP97A5
Cytochrome P450, carotenoid hydroxylase (652 aa)
     
  0.939
EDO99516
Carotenoid isomerase (568 aa)
         
  0.808
PSY
Phytoene synthase (382 aa)
   
   
  0.717
COQ3
Hexaprenyldihydroxybenzoate methyltransferase (263 aa)
   
  0.717
CHLM
Mg protoporphyrin IX S-adenosyl methionine O-methyl transferase (326 aa)
   
  0.717
EDO96144
Methylase (339 aa)
   
  0.717
IDI1
Isopentenyl-diphosphate delta-isomerase (307 aa)
     
   
  0.658
LCYE
Lycopene epsilon cyclase (583 aa)
           
  0.655
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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