Full Link:
STRINGSTRING
EDP03477 EDP03477 EDP06127 EDP06127 EDP06871 EDP06871 EDP03468 EDP03468 POLD2 POLD2 PCN1 PCN1 EDO95996 EDO95996 POLA1 POLA1 EDP03236 EDP03236 EDP08097 EDP08097 EDP06522 EDP06522
"EDP06871" - DNA repair glycosylase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06871DNA repair glycosylase (793 aa)    
Predicted Functional Partners:
EDP06127
Predicted protein (437 aa)
     
  0.917
EDP03477
Predicted protein (264 aa)
       
  0.908
EDO95996
MSH2-like protein (221 aa)
     
 
  0.846
EDP03468
Predicted protein (1192 aa)
       
  0.813
POLA1
DNA polymerase alpha subunit one (1114 aa)
     
   
  0.805
PCN1
PCNA proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (268 aa)
   
 
  0.795
EDP08097
cytosine-C5 specific DNA methyltransferase (2204 aa)
   
 
  0.785
EDP03236
Predicted protein (319 aa)
     
        0.764
POLD2
DNA polymerase delta small subunit (431 aa)
     
   
  0.755
EDP06522
Predicted protein (138 aa)
     
        0.736
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (3%)