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STRINGSTRING
EDP05793 EDP05793 EDP09452 EDP09452 EDO99866 EDO99866 RET1 RET1 EDP05459 EDP05459 EDO98845 EDO98845 EDP07161 EDP07161 EDP01156 EDP01156 EDP05842 EDP05842 EDO99647 EDO99647 EDP05659 EDP05659
"EDP07161" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP07161Predicted protein (239 aa)    
Predicted Functional Partners:
EDP01156
Predicted protein (535 aa)
     
        0.620
EDO98845
Predicted protein (471 aa)
     
        0.617
EDO99866
Predicted protein (382 aa)
     
        0.594
EDP05793
Predicted protein (302 aa)
     
        0.543
EDO99647
Predicted protein (477 aa)
     
        0.525
EDP05659
Predicted protein (308 aa)
     
        0.519
RET1
Predicted protein (1029 aa)
     
        0.517
EDP09452
Predicted protein (296 aa)
     
        0.514
EDP05842
DEAD/DEAH box helicase-related protein (496 aa)
     
        0.512
EDP05459
Predicted protein (202 aa)
     
        0.511
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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