Full Link:
STRINGSTRING
UBQ7 UBQ7 APG5 APG5 UBQ1a UBQ1a APG7 APG7 APG8 APG8 EDP07531 EDP07531 UBQ3 UBQ3 UBQ6 UBQ6 EDP00322 EDP00322 UBQ2 UBQ2 UBQ4 UBQ4
"EDP07531" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP07531Predicted protein (349 aa)    
Predicted Functional Partners:
APG8
Autophagy protein (134 aa)
     
  0.893
EDP00322
Predicted protein (275 aa)
       
  0.859
UBQ6
Ubiquitin fusion protein (805 aa)
     
  0.786
APG7
Autophagy protein (605 aa)
       
  0.776
UBQ7
Ubiquitin-fusion protein (338 aa)
       
  0.758
UBQ4
Ubiquitin (242 aa)
       
  0.758
UBQ2
Bi-ubiquitin (153 aa)
       
  0.758
UBQ1a
Bi-ubiquitin, major isoform (153 aa)
       
  0.758
UBQ3
Bi-ubiquitin (244 aa)
       
  0.758
APG5
Autophagy protein; Required for autophagy (234 aa)
       
  0.729
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (3%)