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RPA30 RPA30 EDP05419 EDP05419 RAD17 RAD17 ATM1 ATM1 EDP06099 EDP06099 EDP01238 EDP01238 ATR1 ATR1 MRE11 MRE11 EDP04113 EDP04113 EDP05379 EDP05379 EDP05135 EDP05135
"ATR1" - DNA damage-sensing protein kinase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATR1DNA damage-sensing protein kinase (3304 aa)    
Predicted Functional Partners:
RAD17
DNA damage checkpoint protein (1026 aa)
     
  0.981
MRE11
MRE11 eukaryotic DNA repair protein (163 aa)
     
  0.976
ATM1
DNA damage signaling kinase, ATM/TEL1-related (950 aa)
     
0.973
EDP05135
SNF2 superfamily protein (1610 aa)
     
  0.969
EDP06099
ATP-dependent DNA helicase (330 aa)
     
  0.968
EDP05419
Predicted protein (489 aa)
     
  0.968
EDP05379
Predicted protein (73 aa)
     
  0.968
EDP04113
Predicted protein (499 aa)
     
  0.968
EDP01238
Predicted protein (307 aa)
     
  0.968
RPA30
Replication protein A 30 kDa subunit (292 aa)
     
  0.962
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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