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STRINGSTRING
EDP09111 EDP09111 EDP09131 EDP09131 PAP1 PAP1 EDP08040 EDP08040 DPE1 DPE1 TOR1 TOR1 GTR6 GTR6 EDP04662 EDP04662 EDP07858 EDP07858 NUOS1 NUOS1 EDO97027 EDO97027
"EDP08040" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08040Predicted protein (132 aa)    
Predicted Functional Partners:
TOR1
Target of rapamycin, growth-regulatory PI3K-like protein kinase (1696 aa)
     
 
  0.608
EDP07858
Predicted protein (1182 aa)
     
      0.571
PAP1
Poly(a) polymerase (407 aa)
     
 
  0.528
GTR6
Glycosyl transferase; group 1 (542 aa)
     
        0.517
EDP09111
Predicted protein (160 aa)
     
        0.502
EDP04662
Predicted protein (596 aa)
     
        0.498
DPE1
4-alpha-glucanotransferase (941 aa)
     
        0.483
EDO97027
Predicted protein (340 aa)
     
        0.478
EDP09131
Predicted protein (1093 aa)
     
        0.475
NUOS1
NADH-ubiquinone oxidoreductase 76 kDa subunit (733 aa)
     
        0.475
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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