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STRINGSTRING
EDP04516 EDP04516 EDP05177 EDP05177 MLH1 MLH1 EDP06286 EDP06286 EDP08693 EDP08693 EDO98289 EDO98289 POL1B POL1B EDP08327 EDP08327 EDP05607 EDP05607 EDP08328 EDP08328
"EDP08327" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08327Predicted protein (756 aa)    
Predicted Functional Partners:
EDP08328
Predicted protein (433 aa)
     
        0.662
POL1B
PolI-like DNA polymerase (894 aa)
     
        0.508
EDP08693
Predicted protein (1357 aa)
     
        0.475
EDP05177
Predicted protein (446 aa)
     
        0.475
EDP06286
Predicted protein (533 aa)
     
        0.424
MLH1
Mismatch repair protein (1007 aa)
     
        0.414
EDP05607
Predicted protein (1663 aa)
     
        0.414
EDP04516
SWI/SNF chromatin remodeling complex component (845 aa)
     
        0.410
EDO98289
Predicted protein (1334 aa)
     
        0.407
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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