Full Link:
STRINGSTRING
MBB1 MBB1 TPR4 TPR4 BBS7 BBS7 BBS5 BBS5 EDP08339 EDP08339 EDP08340 EDP08340 BBS1 BBS1 BBS8 BBS8 BBS9 BBS9 EDP02086 EDP02086 BBS4 BBS4
"EDP08340" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP08340Predicted protein (182 aa)    
Predicted Functional Partners:
BBS5
Bardet-biedl syndrome 5 protein (352 aa)
     
  0.822
BBS7
Bardet-biedl syndrome 7 protein (676 aa)
     
  0.809
BBS1
Bardet-biedl syndrome 1 protein (611 aa)
     
  0.802
BBS8
TRP protein for ciliary function (530 aa)
     
  0.794
BBS9
Bardet-biedl syndrome 9 protein (302 aa)
     
  0.769
EDP08339
Predicted protein (133 aa)
 
 
        0.749
TPR4
Predicted chloroplast-targeted protein (929 aa)
     
  0.720
BBS4
Bardet biedl syndrome 4 protein (407 aa)
     
  0.720
EDP02086
Predicted protein (709 aa)
     
  0.720
MBB1
PsbB mRNA maturation factor (662 aa)
     
  0.720
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (2%)