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POPTR_0016s11660.1 POPTR_0016s11660.1 POPTR_0009s07150.1 POPTR_0009s07150.1 POPTR_0001s25410.1 POPTR_0001s25410.1 POPTR_0006s03390.1 POPTR_0006s03390.1 POPTR_0005s26140.1 POPTR_0005s26140.1 POPTR_0001s04180.1 POPTR_0001s04180.1 POPTR_0002s02340.1 POPTR_0002s02340.1 POPTR_0012s04500.1 POPTR_0012s04500.1 POPTR_1455s00200.1 POPTR_1455s00200.1 POPTR_1455s00210.1 POPTR_1455s00210.1 POPTR_1327s00200.1 POPTR_1327s00200.1
"POPTR_0001s04180.1" - Tubulin alpha-4 chain [source:UniProtKB/TrEMBL in Populus trichocarpa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
POPTR_0001s04180.1Tubulin alpha-4 chain [source-UniProtKB/TrEMBL;Acc-A9P7T6_POPTR]; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (450 aa)    
Predicted Functional Partners:
POPTR_1455s00210.1
Uncharacterized protein (131 aa)
     
0.990
POPTR_1327s00200.1
Uncharacterized protein (273 aa)
     
0.990
POPTR_0016s11660.1
Tubulin, beta chain [source-UniProtKB/TrEMBL;Acc-B9HCI0_POPTR]; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (443 aa)
     
0.990
POPTR_0012s04500.1
Tubulin beta chain [source-UniProtKB/TrEMBL;Acc-B9I2F1_POPTR]; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (444 aa)
     
0.990
POPTR_0009s07150.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PF08_POPTR]; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (446 aa)
     
0.990
POPTR_0006s03390.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9P8S7_POPTR]; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (448 aa)
     
0.990
POPTR_0005s26140.1
Tubulin, beta chain [source-UniProtKB/TrEMBL;Acc-B9H4Y2_POPTR]; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (449 aa)
     
0.990
POPTR_0002s02340.1
Tubulin, beta chain [source-UniProtKB/TrEMBL;Acc-A9PI25_POPTR]; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (449 aa)
     
0.990
POPTR_0001s25410.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9P8E3_POPTR]; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (449 aa)
     
0.990
POPTR_1455s00200.1
Tubulin, beta chain [source-UniProtKB/TrEMBL;Acc-B9HNJ2_POPTR]; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (447 aa)
     
0.990
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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