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POPTR_0009s14930.1 POPTR_0009s14930.1 POPTR_0003s19810.1 POPTR_0003s19810.1 POPTR_0004s19770.1 POPTR_0004s19770.1 POPTR_0001s06360.1 POPTR_0001s06360.1 POPTR_0001s06530.1 POPTR_0001s06530.1 POPTR_0002s23290.1 POPTR_0002s23290.1 POPTR_0014s14780.1 POPTR_0014s14780.1 POPTR_0017s01810.1 POPTR_0017s01810.1 POPTR_0009s14920.1 POPTR_0009s14920.1 POPTR_0004s19750.1 POPTR_0004s19750.1 POPTR_0017s01820.1 POPTR_0017s01820.1
"POPTR_0001s06530.1" - Putative uncharacterized protein [source:UniProtKB/TrEMBL in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
POPTR_0001s06530.1Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9P8U5_POPTR] (196 aa)    
Predicted Functional Partners:
POPTR_0009s14920.1
Predicted protein (254 aa)
   
   
  0.493
POPTR_0004s19750.1
Predicted protein (251 aa)
   
   
  0.493
POPTR_0009s14930.1
Predicted protein (145 aa)
       
      0.457
POPTR_0004s19770.1
Predicted protein (145 aa)
       
      0.457
POPTR_0003s19810.1
Uridine 5’-monophosphate synthase family protein (452 aa)
              0.457
POPTR_0001s06360.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PHV8_POPTR] (475 aa)
              0.457
POPTR_0014s14780.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PG77_POPTR] (325 aa)
   
   
  0.452
POPTR_0002s23290.1
Predicted protein (325 aa)
   
   
  0.452
POPTR_0017s01820.1
Predicted protein (419 aa)
   
   
  0.412
POPTR_0017s01810.1
Predicted protein (89 aa)
   
   
  0.412
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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