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POPTR_0001s16310.1 POPTR_0001s16310.1 POPTR_0018s00740.1 POPTR_0018s00740.1 POPTR_0006s07750.1 POPTR_0006s07750.1 POPTR_0006s25870.1 POPTR_0006s25870.1 POPTR_0014s06540.1 POPTR_0014s06540.1 POPTR_0018s14290.1 POPTR_0018s14290.1 POPTR_0013s01750.1 POPTR_0013s01750.1 POPTR_0001s10940.1 POPTR_0001s10940.1 POPTR_0005s02520.1 POPTR_0005s02520.1 POPTR_0003s07010.1 POPTR_0003s07010.1 POPTR_0002s14930.1 POPTR_0002s14930.1
"POPTR_0001s10940.1" - Predicted protein in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0001s10940.1Predicted protein (267 aa)    
Predicted Functional Partners:
POPTR_0001s16310.1
Predicted protein; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH (237 aa)
     
  0.997
POPTR_0003s07010.1
Predicted protein; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH (237 aa)
     
  0.997
POPTR_0018s00740.1
Predicted protein; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (244 aa)
     
  0.997
POPTR_0006s25870.1
Predicted protein; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (244 aa)
     
  0.997
POPTR_0014s06540.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PHU5_POPTR]; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (223 aa)
     
  0.997
POPTR_0002s14930.1
Predicted protein; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (223 aa)
     
  0.997
POPTR_0013s01750.1
Predicted protein (423 aa)
     
  0.996
POPTR_0005s02520.1
Predicted protein (423 aa)
     
  0.996
POPTR_0018s14290.1
Predicted protein; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (237 aa)
     
  0.996
POPTR_0006s07750.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9P9E4_POPTR]; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (237 aa)
     
  0.996
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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