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POPTR_0010s12180.1 POPTR_0010s12180.1 POPTR_0018s07410.1 POPTR_0018s07410.1 POPTR_0006s14080.1 POPTR_0006s14080.1 POPTR_0014s04380.1 POPTR_0014s04380.1 POPTR_0008s12950.1 POPTR_0008s12950.1 POPTR_0001s29210.1 POPTR_0001s29210.1 POPTR_0001s14040.1 POPTR_0001s14040.1 POPTR_0015s08910.1 POPTR_0015s08910.1 POPTR_0009s07300.1 POPTR_0009s07300.1 POPTR_0001s28090.1 POPTR_0001s28090.1 POPTR_0002s13670.1 POPTR_0002s13670.1
"POPTR_0001s14040.1" - Putative uncharacterized protein [source:UniProtKB/TrEMBL in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0001s14040.1Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9P7X6_POPTR] (574 aa)    
Predicted Functional Partners:
POPTR_0018s07410.1
Predicted protein (258 aa)
 
 
  0.999
POPTR_0006s14080.1
Predicted protein (256 aa)
 
 
  0.999
POPTR_0014s04380.1
Predicted protein (138 aa)
   
 
  0.998
POPTR_0010s12180.1
Predicted protein (97 aa)
   
 
  0.998
POPTR_0009s07300.1
Predicted protein (97 aa)
   
 
  0.998
POPTR_0008s12950.1
Predicted protein (97 aa)
   
 
  0.998
POPTR_0002s13670.1
Predicted protein (129 aa)
   
 
  0.998
POPTR_0001s28090.1
Predicted protein (97 aa)
   
 
  0.998
POPTR_0015s08910.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PED6_POPTR] (282 aa)
   
  0.997
POPTR_0001s29210.1
Predicted protein (683 aa)
   
  0.989
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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