Full Link:
STRINGSTRING
POPTR_0016s08660.1 POPTR_0016s08660.1 POPTR_0001s12700.1 POPTR_0001s12700.1 POPTR_0006s20300.1 POPTR_0006s20300.1 POPTR_0009s05910.1 POPTR_0009s05910.1 POPTR_0018s12080.1 POPTR_0018s12080.1 POPTR_0014s11610.1 POPTR_0014s11610.1 POPTR_0009s12440.1 POPTR_0009s12440.1 POPTR_0001s12380.1 POPTR_0001s12380.1 POPTR_0006s13400.1 POPTR_0006s13400.1 POPTR_0001s25730.1 POPTR_0001s25730.1 POPTR_0001s15190.1 POPTR_0001s15190.1
"POPTR_0001s15190.1" - Predicted protein in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0001s15190.1Predicted protein (453 aa)    
Predicted Functional Partners:
POPTR_0009s12440.1
Predicted protein (821 aa)
     
  0.991
POPTR_0009s05910.1
Predicted protein (814 aa)
     
  0.991
POPTR_0018s12080.1
Predicted protein (726 aa)
     
  0.987
POPTR_0006s20300.1
Predicted protein (726 aa)
     
  0.987
POPTR_0014s11610.1
Predicted protein (718 aa)
     
  0.985
POPTR_0001s12380.1
Predicted protein (842 aa)
     
  0.984
POPTR_0001s12700.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9P972_POPTR] (941 aa)
     
  0.984
POPTR_0001s25730.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PBT1_POPTR] (494 aa)
     
  0.983
POPTR_0016s08660.1
Uncharacterized protein (114 aa)
     
  0.983
POPTR_0006s13400.1
Predicted protein (745 aa)
     
  0.983
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
Server load: low (1%)