Full Link:
STRINGSTRING
POPTR_0609s00200.1 POPTR_0609s00200.1 POPTR_0609s00210.1 POPTR_0609s00210.1 POPTR_0015s14790.1 POPTR_0015s14790.1 POPTR_0001s43340.1 POPTR_0001s43340.1 POPTR_0006s22710.1 POPTR_0006s22710.1 POPTR_0011s15780.1 POPTR_0011s15780.1 POPTR_0001s23120.1 POPTR_0001s23120.1 POPTR_0011s15750.1 POPTR_0011s15750.1 POPTR_0006s24400.1 POPTR_0006s24400.1 POPTR_0006s24390.1 POPTR_0006s24390.1 POPTR_0016s07820.1 POPTR_0016s07820.1
"POPTR_0001s23120.1" - Predicted protein in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0001s23120.1Predicted protein (468 aa)    
Predicted Functional Partners:
POPTR_0011s15780.1
Predicted protein (897 aa)
       
  0.917
POPTR_0011s15750.1
Predicted protein (1691 aa)
       
  0.917
POPTR_0001s43340.1
Predicted protein (885 aa)
       
  0.917
POPTR_0609s00210.1
Uncharacterized protein (365 aa)
         
  0.906
POPTR_0609s00200.1
Uncharacterized protein (522 aa)
         
  0.906
POPTR_0016s07820.1
Predicted protein (577 aa)
         
  0.906
POPTR_0015s14790.1
Predicted protein (636 aa)
         
  0.906
POPTR_0006s24400.1
Predicted protein (573 aa)
         
  0.906
POPTR_0006s24390.1
Predicted protein (570 aa)
         
  0.906
POPTR_0006s22710.1
Predicted protein (514 aa)
         
  0.906
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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