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POPTR_0002s05380.1 POPTR_0002s05380.1 POPTR_0010s10150.1 POPTR_0010s10150.1 POPTR_0013s09690.1 POPTR_0013s09690.1 POPTR_0018s01400.1 POPTR_0018s01400.1 POPTR_0018s01420.1 POPTR_0018s01420.1 POPTR_0019s07900.1 POPTR_0019s07900.1 POPTR_0013s09680.1 POPTR_0013s09680.1 POPTR_0006s26650.1 POPTR_0006s26650.1 POPTR_0005s23120.1 POPTR_0005s23120.1 POPTR_0001s28550.1 POPTR_0001s28550.1 POPTR_0006s26660.1 POPTR_0006s26660.1
"POPTR_0001s28550.1" - Predicted protein in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
POPTR_0001s28550.1Predicted protein (218 aa)    
Predicted Functional Partners:
POPTR_0006s26660.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PD29_POPTR]; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (221 aa)
     
  0.987
POPTR_0018s01420.1
Predicted protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (221 aa)
     
  0.987
POPTR_0006s26650.1
Predicted protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (221 aa)
     
  0.987
POPTR_0018s01400.1
Predicted protein (221 aa)
     
  0.986
POPTR_0010s10150.1
Predicted protein (540 aa)
     
  0.980
POPTR_0005s23120.1
Predicted protein (542 aa)
     
  0.980
POPTR_0002s05380.1
Predicted protein (543 aa)
     
  0.980
POPTR_0019s07900.1
Predicted protein (1081 aa)
     
  0.965
POPTR_0013s09690.1
Annotation not available (296 aa)
     
  0.965
POPTR_0013s09680.1
Exportin1 family protein (685 aa)
     
  0.965
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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