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POPTR_0019s03530.1 POPTR_0019s03530.1 POPTR_0013s04350.1 POPTR_0013s04350.1 POPTR_0010s22830.1 POPTR_0010s22830.1 POPTR_0006s04760.1 POPTR_0006s04760.1 POPTR_0001s33840.1 POPTR_0001s33840.1 POPTR_0014s11580.1 POPTR_0014s11580.1 POPTR_0006s17980.1 POPTR_0006s17980.1 POPTR_0004s08950.1 POPTR_0004s08950.1 POPTR_0002s00460.1 POPTR_0002s00460.1 POPTR_0002s19710.1 POPTR_0002s19710.1 POPTR_0014s01040.1 POPTR_0014s01040.1
"POPTR_0001s33840.1" - Predicted protein in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0001s33840.1Predicted protein (347 aa)    
Predicted Functional Partners:
POPTR_0019s03530.1
Predicted protein (359 aa)
       
      0.597
POPTR_0013s04350.1
Predicted protein (356 aa)
       
      0.597
POPTR_0014s01040.1
Uncharacterized protein (186 aa)
   
 
 
  0.552
POPTR_0004s08950.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PHY1_POPTR] (518 aa)
   
        0.532
POPTR_0006s04760.1
Predicted protein (510 aa)
   
 
  0.526
POPTR_0002s19710.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PHK5_POPTR] (127 aa)
   
        0.518
POPTR_0014s11580.1
Predicted protein (126 aa)
   
          0.510
POPTR_0002s00460.1
Predicted protein (148 aa)
   
          0.509
POPTR_0010s22830.1
P-aminobenzoate synthase [source-UniProtKB/TrEMBL;Acc-B9HUE3_POPTR] (928 aa)
         
  0.508
POPTR_0006s17980.1
Uncharacterized protein (205 aa)
   
        0.500
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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