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AMT1;4 AMT1;4 MEE68 MEE68 AT1G28135 AT1G28135 ARV1 ARV1 AT1G55805 AT1G55805 AT2G23780 AT2G23780 NAC001 NAC001 AT1G62820 AT1G62820 AT1G28140 AT1G28140 AT1G52650 AT1G52650 AT1G55800 AT1G55800
"ARV1" - Arv1-like protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARV1Arv1-like protein (245 aa)    
Predicted Functional Partners:
AT2G23780
Ubiquitin-protein ligase RNF5 (227 aa)
           
  0.879
AT1G52650
F-box/LRR-repeat protein (507 aa)
           
  0.869
AT1G28135
Uncharacterized protein (51 aa)
           
  0.869
MEE68
Homeobox protein 22; Essential protein. Putative transcription factor (220 aa)
           
  0.868
NAC001
NAC domain containing protein 1; Transcriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP) (429 aa)
           
  0.866
AT1G55800
Uncharacterized protein (314 aa)
           
  0.777
AT1G62820
Calcium-binding EF-hand family protein; Potential calcium sensor (148 aa)
       
 
  0.740
AT1G55805
BolA-like-like protein; May act either alone or in interaction with glutaredoxin as a redox-regulated transcriptional regulator, or as a factor regulating Fe-S cluster biogenesis (Probable). The glutaredoxin- BOLA1 heterodimers bind a labile, oxygen sensitive iron-sulfur cluster (PubMed-24714563) (160 aa)
           
  0.678
AMT1;4
Ammonium transporter 1;4; High affinity ammonium transporter in the plasma membrane (504 aa)
           
  0.677
AT1G28140
Uncharacterized protein (280 aa)
           
  0.673
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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