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GDU1 GDU1 BBX8 BBX8 COR314-TM2 COR314-TM2 AT5G04350 AT5G04350 ISA1 ISA1 AT4G04750 AT4G04750 AT1G01130 AT1G01130 AT3G29320 AT3G29320 BAM6 BAM6 RNR1 RNR1 ATDUF1 ATDUF1
"AT1G01130" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G01130Uncharacterized protein (124 aa)    
Predicted Functional Partners:
AT5G04350
Self-incompatibility S1 family protein (146 aa)
           
  0.861
AT4G04750
Sugar transporter ERD6-like 14; Sugar transporter (482 aa)
           
  0.842
BBX8
B-box domain protein 8 (373 aa)
           
  0.670
ATDUF1
Uncharacterized protein (670 aa)
           
  0.670
RNR1
Ribonucleotide reductase 1; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. R1 contains the binding sites for both substrates and allosteric effectors and carries out the actual reduction of the ribonucleotide. Ribonucleotide reductase (RNR) complex function is essential for efficient organellar DNA degradation in pollen. Involved in chloroplast division (816 aa)
           
  0.635
COR314-TM2
Cold regulated 314 thylakoid membrane 2 (226 aa)
           
  0.634
ISA1
Isoamylase 1; Involved in the trimming of pre-amylopectin chains. Accelerates the crystallization of nascent amylopectin molecules during starch synthesis. ISA1 and ISA2 work exclusively together as a multimeric holoenzyme. ISA1-ISA2 removes preferentially branches that are very close to other branches (783 aa)
           
  0.560
BAM6
Beta-amylase 6 (577 aa)
           
  0.506
AT3G29320
Alpha-glucan phosphorylase 1; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (By similarity). May be not required for the degradation of starch, but the phosphorolysis of starch may play an important role in water stress tolerance (962 aa)
           
  0.491
GDU1
Glutamine dumper 1; Probable subunit of an amino acid transporter involved in the regulation of the amino acid metabolism. Stimulates amino acid export by activating nonselective amino acid facilitators. Required the interaction with the RING-type E3 ubiquitin-protein ligase LOG2 to fulfill its function. Plays a role in the Gln export at hydathodes, at xylem parenchyma into xylem sap and from mesophyll into leaf apoplasm. Acts upstream genes involved in the salicylic acid (SA) pathway and in the geminivirus-host interaction (158 aa)
           
  0.489
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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