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AT5G48385 AT5G48385 AT3G22440 AT3G22440 CDKC;1 CDKC;1 AT5G38640 AT5G38640 AT1G01440 AT1G01440 AT4G01090 AT4G01090 RBCS2B RBCS2B KAN KAN LSU1 LSU1 AT3G51180 AT3G51180 AT1G31050 AT1G31050
"AT1G01440" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G01440Uncharacterized protein (664 aa)    
Predicted Functional Partners:
AT1G31050
Basic helix-loop-helix domain-containing protein (434 aa)
       
      0.856
AT4G01090
Uncharacterized protein (714 aa)
     
   
0.642
AT5G38640
NagB/RpiA/CoA transferase-like superfamily protein (642 aa)
     
      0.607
KAN
KANADI; Transcriptional repressor that regulates lateral organ polarity. Promotes lateral organ abaxial identity by repressing the adaxial regulator ASYMMETRIC LEAVES2 (AS2) in abaxial cells. Required for abaxial identity in both leaves and carpels. Functions with KAN2 in the specification of polarity of the ovule outer integument. Regulates cambium activity by repressing the auxin efflux carrier PIN1. Plays a role in lateral root formation and development (403 aa)
     
      0.606
AT3G22440
FRIGIDA-like protein (532 aa)
     
      0.601
AT5G48385
FRIGIDA-like protein (558 aa)
       
      0.588
RBCS2B
Rubisco small subunit 2B; RuBisCO catalyzes two reactions- the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site (By similarity) (181 aa)
       
      0.588
CDKC;1
Cyclin-dependent kinase C-1 (505 aa)
       
      0.588
AT3G51180
Zinc finger CCCH domain-containing protein 45 (521 aa)
       
      0.588
LSU1
RESPONSE TO LOW SULFUR 1 (94 aa)
       
      0.588
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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