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AGL86 AGL86 AGL90 AGL90 AGL38 AGL38 AT4G32820 AT4G32820 AGL96 AGL96 AT5G46950 AT5G46950 AGL28 AGL28 AGL48 AGL48 PHE1 PHE1 AGL36 AGL36 AT2G17055 AT2G17055
"AGL28" - AGAMOUS-like 28 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGL28AGAMOUS-like 28; Probable transcription factor that may function as a floral promoter operating upstream of known floral activators in the autonomous pathway (247 aa)    
Predicted Functional Partners:
AGL36
AGAMOUS-like 36; Probable transcription factor (366 aa)
     
 
  0.944
PHE1
PHERES1; Probable transcription factor involved in the development of gametophytes and seeds (279 aa)
     
 
  0.944
AGL90
AGAMOUS-like 90; Probable transcription factor (320 aa)
     
   
  0.877
AGL38
AGAMOUS-like 38; Probable transcription factor involved in the development of gametophytes and seeds (278 aa)
     
 
  0.846
AGL86
AGAMOUS-like 86; Probable transcription factor (339 aa)
       
 
  0.845
AGL96
AGAMOUS-like 96 (242 aa)
     
   
  0.806
AT4G32820
Tetratricopeptide repeat domain-containing protein (1872 aa)
       
  0.723
AGL48
AGAMOUS-like 48 (371 aa)
     
   
  0.714
AT5G46950
Plant invertase/pectin methylesterase inhibitor superfamily protein (174 aa)
     
   
  0.701
AT2G17055
Toll-Interleukin-Resistance (TIR) domain family protein (136 aa)
           
  0.676
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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