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KAK KAK AT5G22310 AT5G22310 HUB1 HUB1 AT3G11590 AT3G11590 AT4G32190 AT4G32190 AT1G01630 AT1G01630 AT4G15730 AT4G15730 EMB2816 EMB2816 AT5G24490 AT5G24490 RABA2c RABA2c AT3G11920 AT3G11920
"AT1G01630" - Protein sec fourteen-like protein-20 in Arabidopsis thaliana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AT1G01630Protein sec fourteen-like protein-20 (255 aa)    
Predicted Functional Partners:
AT3G11920
Glutaredoxin-related (630 aa)
           
  0.867
AT5G24490
Putative 30S ribosomal protein (308 aa)
     
   
  0.837
EMB2816
EMBRYO DEFECTIVE 2816; Component of LSM protein complexes, which are involved in RNA processing. Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation by promoting decapping and leading to accurate 5’-3’ mRNA decay. The cytoplasmic LSM1-LSM7 complex regulates developmental gene expression by the decapping of specific development-related transcripts. Component of the nuclear LSM2-LSM8 complex which is involved splicing nuclear mRNAs. LSM2-LSM8 binds directly to the U6 small nuclear RNAs (snRNAs) and is essential for accurate splicing of selected developmen [...] (99 aa)
           
  0.807
RABA2c
RAB GTPase homolog A2C; Intracellular vesicle trafficking and protein transport (217 aa)
           
  0.737
KAK
KAKTUS; Probable E3 ubiquitin-protein ligase which mediates ubiquitination and subsequent proteasomal degradation of target proteins. Involved in the repression of endoreduplication process and the cell morphogenesis in the trichomes (1888 aa)
     
   
  0.591
AT5G22310
Uncharacterized protein (481 aa)
       
      0.588
AT4G32190
Myosin heavy chain-related protein (783 aa)
       
      0.588
AT4G15730
CW-type Zinc Finger (1059 aa)
       
      0.588
AT3G11590
Uncharacterized protein (622 aa)
       
      0.588
HUB1
Histone mono-ubiquitination 1; E3 ubiquitin-protein ligase that monoubiquitinates H2B to form H2BK143ub1. H2BK143ub1 gives a specific tag for epigenetic transcriptional activation and is also prerequisite for H3K4me and maybe H3K79me. It thereby plays a central role in histone code and gene regulation. Forms a ubiquitin ligase complex in cooperation with the E2 enzyme UBC2/RAD6. Required for the regulation of flowering time and defense against necrotrophic fungal pathogens (PubMed-12535538, PubMed-17329565, PubMed-17329563, PubMed-19286969). Involved in the control of seed dormancy and [...] (878 aa)
       
      0.588
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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