Full Link:
STRINGSTRING
AT2G42240 AT2G42240 AT3G13700 AT3G13700 AT5G01290 AT5G01290 BSL2 BSL2 AT3G09100 AT3G09100 AT5G28210 AT5G28210 AT1G03457 AT1G03457 NET3A NET3A At2g16950 At2g16950 AT2G16960 AT2G16960 AT1G12050 AT1G12050
"AT1G03457" - RNA recognition motif-containing protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G03457RNA recognition motif-containing protein; RNA-binding protein involved in the regulation of flowering time. Acts as repressor of the activity of SOC1, a transcriptional activator of flowering time. Binds to the 3’-UTR of SOC1 mRNA in the cytoplasm and participates in SOC1 mRNA decay, mediated by the distal region of the SOC1 3’-UTR (438 aa)    
Predicted Functional Partners:
AT1G12050
Fumarylacetoacetase (421 aa)
       
      0.831
NET3A
Networked 3A; Plant-specific actin binding protein. May be part of a membrane-cytoskeletal adapter complex (269 aa)
           
  0.739
AT5G28210
mRNA capping enzyme family protein (625 aa)
       
      0.666
AT5G01290
mRNA capping enzyme family protein (657 aa)
       
      0.666
AT3G09100
mRNA capping enzyme-like protein (672 aa)
       
      0.666
AT3G13700
RNA recognition motif-containing protein (296 aa)
     
 
  0.647
AT2G42240
RNA recognition motif-containing protein (302 aa)
     
 
  0.647
BSL2
BRI1 suppressor 1 (BSU1)-like 2; Phosphatase involved in elongation process, probably by acting as a regulator of brassinolide signaling (1018 aa)
           
  0.633
AT2G16960
ARM repeat-containing protein (547 aa)
       
      0.623
At2g16950
Transportin 1; Functions in nuclear protein import as nuclear transport receptor. Serves as receptor for nuclear localization signals (NLS) in cargo substrates. Is thought to mediate docking of the importin/substrate complex to the nuclear pore complex (NPC) through binding to nucleoporin and the complex is subsequently translocated through the pore by an energy requiring, Ran- dependent mechanism. At the nucleoplasmic side of the NPC, Ran binds to the importin, the importin/substrate complex dissociates and importin is re-exported from the nucleus to the cytoplasm where GTP hydrolysis [...] (895 aa)
       
      0.623
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (1%)