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SCL3 SCL3 PSKR2 PSKR2 AT5G63930 AT5G63930 SHR SHR AT2G20050 AT2G20050 MGP MGP SCR SCR AT3G13350 AT3G13350 AT1G76110 AT1G76110 AT1G04880 AT1G04880 AT1G55650 AT1G55650
"MGP" - Magpie in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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MGPMagpie; Transcription factor that regulates tissue boundaries and asymmetric cell division (PubMed-17785527). Might be involved in the sequestration of ’SHORT-ROOT’ to the nucleus (PubMed-17785527). Interacts with the SCR and MGP promoters (PubMed-21935722). Does not show transcription activity by itself, but regulates the transcription of downstream genes through interaction with other transcription factors (PubMed-21935722) (506 aa)    
Predicted Functional Partners:
AT2G20050
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein (1094 aa)
     
  0.971
SHR
SHORT ROOT; Transcription factor required for quiescent center cells specification and maintenance of surrounding stem cells, and for the asymmetric cell division involved in radial pattern formation in roots. Essential for both cell division and cell specification. Regulates the radial organization of the shoot axial organs and is required for normal shoot gravitropism. Directly controls the transcription of SCR, and when associated with SCR, of MGP, RLK, TRI, NUC and SCL3 (531 aa)
       
 
  0.928
SCR
SCARECROW; Transcription factor required for quiescent center cells specification and maintenance of surrounding stem cells, and for the asymmetric cell division involved in radial pattern formation in roots. Essential for cell division but not differentiation of the ground tissue. Also required for normal shoot gravitropism. Regulates the radial organization of the shoot axial organs. Binds to the promoter of MGP, NUC, RLK and SCL3. Restricts SHR movment and sequesters it into the nucleus of the endodermis (653 aa)
       
 
  0.884
SCL3
Scarecrow-like 3; Probable transcription factor involved in plant development (482 aa)
       
 
  0.878
AT3G13350
HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain; Binds preferentially DNA with A/T-rich content (319 aa)
       
  0.742
AT1G76110
HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain; Binds preferentially DNA with A/T-rich content (PubMed-19053246). Required for karyogamy during female gametophyte development, when the two polar nuclei fuse to form the diploid central cell nucleus (PubMed-16698901) (338 aa)
       
  0.742
AT1G55650
HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain; Binds preferentially DNA with A/T-rich content (337 aa)
       
  0.742
AT1G04880
HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain; Binds preferentially DNA with A/T-rich content (448 aa)
       
  0.742
PSKR2
Phytosulfokine receptor 2; Phytosulfokine receptor with a serine/threonine-protein kinase activity (1036 aa)
     
  0.736
AT5G63930
Leucine-rich repeat protein kinase-like protein (1102 aa)
     
  0.735
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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