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STRINGSTRING
SNAP33 SNAP33 NSF NSF SYP31 SYP31 SEC22 SEC22 SYP122 SYP122 SYP32 SYP32 SYP121 SYP121 SYP111 SYP111 SYP132 SYP132 VAMP721 VAMP721 NPSN11 NPSN11
"VAMP721" - Vesicle-associated membrane protein 721 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VAMP721Vesicle-associated membrane protein 721; Involved in the targeting and/or fusion of transport vesicles to their target membrane (219 aa)    
Predicted Functional Partners:
SNAP33
SNAP25 homologous protein SNAP33; t-SNARE involved in diverse vesicle trafficking and membrane fusion processes, including cell plate formation. May function in the secretory pathway (300 aa)
     
  0.997
SYP121
Syntaxin-121; Vesicle trafficking protein that functions in the secretory pathway (346 aa)
     
  0.991
SYP111
Syntaxin of plants 111; Involved in cytokinesis. Acts as a cell plate-specific syntaxin, required for the fusion of vesicles at the plane of cell division (310 aa)
     
  0.990
SYP132
Syntaxin-132 (315 aa)
     
  0.985
SEC22
SECRETION 22; V-SNARE involved in vesicle trafficking from the ER to the Golgi complex (218 aa)
       
  0.984
SYP122
Syntaxin-122; Vesicle trafficking protein that functions in the secretory pathway (341 aa)
     
  0.978
NSF
Vesicle-fusing ATPase; Involved in vesicle-mediated transport. The ATPase activity of NSF serves to disassemble the SNARE complex, freeing the components for subsequent pairing and fusion events (742 aa)
     
 
  0.972
NPSN11
Novel plant SNARE 11; t-SNARE involved in diverse vesicle trafficking and membrane fusion processes, including cell plate formation (265 aa)
     
  0.971
SYP31
Syntaxin-31; Vesicle trafficking protein that functions in the secretory pathway (336 aa)
     
  0.970
SYP32
Syntaxin-32; Vesicle trafficking protein that functions in the secretory pathway (361 aa)
     
  0.964
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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