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RABG3B RABG3B RABG1 RABG1 RAB7B RAB7B RABG3A RABG3A RAB7A RAB7A AT1G04830 AT1G04830 RABG3c RABG3c PP2AB2 PP2AB2 PP2AB1 PP2AB1 RABG3E RABG3E RABG3d RABG3d
"AT1G04830" - RabGAP/TBC domain-containing protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G04830RabGAP/TBC domain-containing protein (459 aa)    
Predicted Functional Partners:
PP2AB2
Protein phosphatase 2A, regulatory subunit PR55; The B regulatory subunit may modulate substrate selectivity and catalytic activity, and also may direct the localization of the catalytic enzyme to a particular subcellular compartment (501 aa)
     
 
  0.577
RABG1
RAB GTPase homolog G1; Intracellular vesicle trafficking and protein transport (204 aa)
       
 
  0.566
RABG3A
RAB GTPase homolog G3A (217 aa)
       
 
  0.566
RAB7B
RAB GTPase homolog G3F; Intracellular vesicle trafficking and protein transport (206 aa)
       
 
  0.566
RABG3c
RAB GTPase homolog G3C; Intracellular vesicle trafficking and protein transport (206 aa)
       
 
  0.566
RAB7A
RAB GTPase homolog 7A; Intracellular vesicle trafficking and protein transport (212 aa)
       
 
  0.566
RABG3d
RAB GTPase homolog G3D; Intracellular vesicle trafficking and protein transport (206 aa)
       
 
  0.566
RABG3E
RAB GTPase homolog G3E; Intracellular vesicle trafficking and protein transport. May play a role in adaptation to stress by recylcing macromolecules in specific cellular compartments (206 aa)
       
 
  0.566
RABG3B
RAB GTPase homolog G3B; Intracellular vesicle trafficking and protein transport. Functions in autophagy. Involved in xylem and tracheary element differentiation (203 aa)
       
 
  0.566
PP2AB1
55 kDa B regulatory subunit of phosphatase 2A mRNA,; The B regulatory subunit may modulate substrate selectivity and catalytic activity, and also may direct the localization of the catalytic enzyme to a particular subcellular compartment (603 aa)
       
 
  0.565
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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