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PD1 PD1 LPA2 LPA2 AT1G67700 AT1G67700 HCF136 HCF136 CYP38 CYP38 PSBA PSBA PSB27 PSB27 LPA19 LPA19 At2g20860 At2g20860 AT2G03390 AT2G03390 MEE11 MEE11
"LPA19" - LOW PSII ACCUMULATION 19 in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
LPA19LOW PSII ACCUMULATION 19; Required, but not essential, for D1 (psbA) precursor processing and thus correct photosystem II assembly (PSII) (199 aa)    
Predicted Functional Partners:
PSB27
Photosystem II Psb27 protein; Probably involved in repair of photodamaged photosystem II (PSII) (174 aa)
     
   
  0.883
PSBA
Photosystem II reaction center protein A; Photosystem II (PSII) is a light-driven water- plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors (353 aa)
       
 
  0.747
HCF136
HIGH CHLOROPHYLL FLUORESCENCE 136; Essential for photosystem II (PSII) biogenesis; required for assembly of an early intermediate in PSII assembly that includes D2 (psbD) and cytochrome b559. Has been suggested (PubMed-11826309) to be required for chlorophyll a binding (403 aa)
     
   
  0.746
AT2G03390
uvrB/uvrC motif-containing protein (330 aa)
     
   
  0.737
AT1G67700
Uncharacterized protein; Involved in photoprotection. Forms a complex with LQY1 that is involved in the repair and reassembly cycle of the PSII- LHCII supercomplex under high-light conditions. May function in guiding the release of psbC from PSII core monomers (231 aa)
     
   
  0.731
LPA2
Low psii accumulation2; Involved in assisting chlorophyll a binding protein psbC assembly within photosystem II (PSII). Works cooperatively with LPA3 (185 aa)
     
   
  0.700
MEE11
F-box protein SKIP28; Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Required during the endosperm development in embryos (292 aa)
     
   
  0.685
CYP38
Cyclophilin 38; Required for the assembly and stabilization of PSII, but has no PPIases activity (437 aa)
     
   
  0.674
At2g20860
Lipoic acid synthase 1; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives (374 aa)
           
  0.670
PD1
Arogenate dehydratase 3; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine. Together with GCR1 and GPA1, required for blue light-mediated synthesis of phenylpyruvate and subsequently of phenylalanine (Phe), in etiolated seedlings (424 aa)
           
  0.662
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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