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AT5G64640 AT5G64640 PME2 PME2 AT5G61680 AT5G61680 QRT1 QRT1 PMEPCRF PMEPCRF AT1G05650 AT1G05650 AT5G51500 AT5G51500 AT1G02810 AT1G02810 AT2G47550 AT2G47550 ATCSLB05 ATCSLB05 AT5G04960 AT5G04960
"AT1G05650" - Pectin lyase-like protein in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Textmining
[Homology]
Score
AT1G05650Pectin lyase-like protein (394 aa)    
Predicted Functional Partners:
AT1G02810
Pectinesterase 7; Acts in the modification of cell walls via demethylesterification of cell wall pectin (579 aa)
       
  0.879
AT5G04960
Putative pectinesterase/pectinesterase inhibitor 46; Acts in the modification of cell walls via demethylesterification of cell wall pectin (564 aa)
       
  0.867
PME2
Pectinesterase 2; Acts in the modification of cell walls via demethylesterification of cell wall pectin (587 aa)
   
 
  0.760
ATCSLB05
Cellulose synthase-like protein B5; Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall (757 aa)
     
   
  0.736
AT5G51500
Putative pectinesterase/pectinesterase inhibitor 60; Acts in the modification of cell walls via demethylesterification of cell wall pectin (540 aa)
   
 
  0.725
AT2G47550
Pectinesterase 20; Acts in the modification of cell walls via demethylesterification of cell wall pectin (560 aa)
   
 
  0.723
AT5G64640
Putative pectinesterase/pectinesterase inhibitor 64; Acts in the modification of cell walls via demethylesterification of cell wall pectin (602 aa)
       
  0.714
AT5G61680
Putative pectinesterase 63; Acts in the modification of cell walls via demethylesterification of cell wall pectin (338 aa)
       
  0.714
QRT1
QUARTET 1; Pectinesterase required for cell type-specific pectin degradation to separate microspores (380 aa)
       
  0.714
PMEPCRF
Pectin methylesterase PCR fragment F; Acts in the modification of cell walls via demethylesterification of cell wall pectin (587 aa)
       
  0.714
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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