Genes that are sometimes fused into single open reading frames.
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
MATERNAL EFFECT EMBRYO ARREST 5 (987 aa)
Predicted Functional Partners:
Ribosomal protein L5 B; Binds to 5S ribosomal RNA (301 aa)
Ribosomal protein L5; Binds to 5S ribosomal RNA (301 aa)
EMBRYO DEFECTIVE 3105; Binds 5S rRNA, forms part of the central protuberance of the 50S subunit (170 aa)
ABNORMAL SUSPENSOR 2 (2359 aa)
Modifier of snc1,4; Component of the MAC complex that probably regulates defense responses through transcriptional control and thereby is essential for plant innate immunity. Involved in mRNA splicing (253 aa)
60S ribosomal protein L11-1; Binds to 5S ribosomal RNA (182 aa)
Ribosomal protein L16B; Binds to 5S ribosomal RNA (182 aa)
60S ribosomal protein L11-2 (182 aa)
60S ribosomal protein L11-2; Binds to 5S ribosomal RNA (182 aa)
50S ribosomal protein L5; Binds 5S rRNA, forms part of the central protuberance of the 50S subunit (262 aa)
Your Current Organism:
NCBI taxonomy Id: 3702 Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress