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DFO DFO AT1G02040 AT1G02040 MEE48 MEE48 MYB80 MYB80 LBD32 LBD32 CYP704B1 CYP704B1 LBD2 LBD2 LBD26 LBD26 AT5G63080 AT5G63080 AT5G63100 AT5G63100 LBD42 LBD42
"LBD2" - LOB domain-containing protein 2 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBD2LOB domain-containing protein 2 (206 aa)    
Predicted Functional Partners:
AT1G02040
C2H2-type zinc finger protein (324 aa)
     
   
  0.969
LBD32
LOB domain-containing protein 32 (192 aa)
           
  0.731
AT5G63100
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (329 aa)
           
  0.636
LBD26
LOB domain-containing protein 26 (153 aa)
           
  0.633
MYB80
Myb domain protein 103 (320 aa)
     
   
  0.623
DFO
DSB formation (233 aa)
           
  0.556
AT5G63080
Transcription factor jumonji (jmjC) domain-containing protein (462 aa)
           
  0.505
CYP704B1
Cytochrome P450, family 704, subfamily B, polypeptide 1; Involved in pollen wall development. Catalyzes the conversion of long-chain fatty acids to the corresponding omega- hydroxylated fatty acids. Omega-hydroxylated fatty acids, together with in-chain hydroxylated fatty acids, are key monomeric aliphatic building blocks for sporopollenin synthesis during exine formation (524 aa)
     
        0.473
MEE48
Maternal effect embryo arrest 48; Probable beta-1,3-glucanase that may be involved in the degradation of callose walls around the microspore tetrad during pollen development (Probable). May be required for pollen exine formation (PubMed-21849515) (478 aa)
     
        0.459
LBD42
LOB domain-containing protein 42 (233 aa)
           
  0.450
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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