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OBF5 OBF5 AT1G67310 AT1G67310 CYP81D11 CYP81D11 ASG2 ASG2 TGA6 TGA6 SCL14 SCL14 AT3G44326 AT3G44326 AHBP-1B AHBP-1B AT2G27310 AT2G27310 BPC2 BPC2 BPC1 BPC1
"SCL14" - SCARECROW-like 14 in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
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[Homology]
Score
SCL14SCARECROW-like 14; Probable transcription factor involved in plant development (769 aa)    
Predicted Functional Partners:
AHBP-1B
Transcription factor TGA2; Transcriptional activator that binds specifically to the DNA sequence 5’-TGACG-3’. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Required to induce the systemic acquired resistance (SAR) via the regulation of pathogenesis-related genes expression. Binding to the as-1 element of PR-1 promoter is salicylic acid- inducible and mediated by NPR1. Could also bind to the C-boxes (5’-ATGACGTCAT-3’) with high affinity (330 aa)
     
 
  0.843
ASG2
ALTERED SEED GERMINATION 2 (757 aa)
     
   
  0.599
AT1G67310
Calmodulin-binding transcription activator 4; Regulates transcriptional activity in response to calcium signals. Binds to the consensus sequence 5’- [ACG]CGCG[GTC]-3’ (1016 aa)
     
   
  0.518
CYP81D11
Cytochrome P450 CYP81D11; May play a role in cis-jasmone-activated defense response to aphids (509 aa)
           
  0.505
TGA6
Transcription factor TGA6 (355 aa)
     
   
  0.498
AT3G44326
F-box protein (363 aa)
           
  0.479
AT2G27310
F-box protein (337 aa)
           
  0.479
BPC1
Basic pentacysteine1; Transcriptional regulator that specifically binds to GA- rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes. Negatively regulates the homeotic gene AGL11/STK, which controls ovule primordium identity, by a cooperative binding to purine-rich elements present in the regulatory sequence leading to DNA conformational changes (283 aa)
           
  0.468
BPC2
Basic pentacysteine 2; Transcriptional regulator that specifically binds to GA- rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes (279 aa)
           
  0.468
OBF5
Transcription factor TGA5; Transcriptional activator that binds specifically to the DNA sequence 5’-TGACG-3’. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5’-TGACGTGG-3’) another cis-acting element found in plant histone promoters (330 aa)
           
  0.450
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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