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FRS5 FRS5 ATRX ATRX FRS10 FRS10 AT3G22220 AT3G22220 UBP13 UBP13 JMJ14 JMJ14 AT1G09040 AT1G09040 MOM MOM LD LD AT3G52250 AT3G52250 AT1G09050 AT1G09050
"AT1G09040" - Uncharacterized protein in Arabidopsis thaliana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
AT1G09040Uncharacterized protein (911 aa)    
Predicted Functional Partners:
LD
Luminidependens; Seems to play a role in the regulation of flowering time in the autonomous flowering pathway by repressing FLOWERING LOCUS C expression (953 aa)
     
   
  0.531
AT3G52250
Duplicated SANT DNA-binding domain-containing protein (1656 aa)
     
   
  0.458
AT3G22220
hAT transposon superfamily (761 aa)
     
        0.435
UBP13
Ubiquitin-specific protease 13; Recognizes and hydrolyzes the peptide bond at the C- terminal Gly of ubiquitin. Involved in the processing of poly- ubiquitin precursors as well as that of ubiquitinated proteins (By similarity) (1115 aa)
     
        0.433
AT1G09050
Uncharacterized protein (916 aa)
     
     
0.430
FRS10
FAR1-related sequence 10 (685 aa)
     
        0.424
FRS5
FAR1-related sequence 5; Putative transcription activator involved in regulating light control of development (788 aa)
     
        0.423
MOM
MORPHEUS MOLECULE; Required for the heritable maintenance of transcriptional gene silencing (TGS) in heterochromatin, and particularly in the intermediate bivalent heterochromatin, characterized by an unsual methylation pattern consisting in hypermethylated DNA and histone H3 ’Lys-4’ methylation (H3K4me) together with depletion of histone H3 ’Lys-9’ methylation (H3K9me), in a chromatin methylation-independent manner, in a non- CG methylation context. May play a role in the RNA polymerase IV/V (Pol-IV/V)-mediated RNA-directed DNA methylation (RdDM) leading to TGS (also called siRNA-medi [...] (2001 aa)
     
        0.416
JMJ14
JUMONJI 14; Histone demethylase that demethylates ’Lys-4’ (H3K4me) of histone H3 with a higher activity for H3K4me3 and H3K4me2 than H3K4me1. No activity on H3K9me3/2, H3K36me3/2 and H3K27me3/2. Represses FT and TSF expression to inhibit the floral transition. Binds around the transcription start site of the FT locus. Involved in the DRM2-mediated maintenance of DNA methylation, but not required for the de novo DNA methylation. Required for demethylating histone H3K4me3 at the target of RNA silencing (954 aa)
     
        0.412
ATRX
DEAD-like helicase domain-containing protein; Involved in transcriptional regulation and chromatin remodeling. Facilitates DNA replication in multiple cellular environments and is required for efficient replication of a subset of genomic loci. Binds to DNA tandem repeat sequences in both telomeres and euchromatin and in vitro binds DNA quadruplex structures. May help stabilizing G-rich regions into regular chromatin structures by remodeling G4 DNA and incorporating H3.3- containing nucleosomes (By similarity). Involved in DNA repair of gamma-irradiation-mediated damages (PubMed-16547115) (1479 aa)
     
        0.409
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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