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BT1 BT1 AT1G48750 AT1G48750 VAB2 VAB2 AT5G25560 AT5G25560 AT5G62930 AT5G62930 AT5G01870 AT5G01870 AT1G09390 AT1G09390 AT3G42050 AT3G42050 AT3G58630 AT3G58630 AT1G62510 AT1G62510 PP2-A9 PP2-A9
"AT1G09390" - GDSL esterase/lipase in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G09390GDSL esterase/lipase (370 aa)    
Predicted Functional Partners:
AT5G62930
GDSL esterase/lipase (242 aa)
           
  0.738
AT1G48750
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like protein (94 aa)
           
  0.701
AT3G58630
Sequence-specific DNA binding transcription factor (321 aa)
           
  0.671
AT5G25560
CHY and CTCHY and RING-type zinc finger protein (328 aa)
           
  0.670
AT1G62510
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like protein (149 aa)
           
  0.670
PP2-A9
Phloem protein 2-A9 (180 aa)
           
  0.634
BT1
BTB and TAZ domain protein 1; May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Also targeted for degradation by the 26S proteasome pathway. May be involved in gametophyte development (365 aa)
           
  0.602
VAB2
V-ATPase B subunit 2; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells (494 aa)
           
  0.600
AT3G42050
V-type proton ATPase subunit H; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit H activates the ATPase activity of the enzyme and couples ATPase activity to proton flow. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system (By similarity) (441 aa)
           
  0.560
AT5G01870
Non-specific lipid-transfer protein 10; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues (By similarity) (116 aa)
           
  0.558
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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