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POLA2 POLA2 TRM7 TRM7 AT5G01910 AT5G01910 AT4G14200 AT4G14200 AT4G39630 AT4G39630 AT5G48310 AT5G48310 AT3G42660 AT3G42660 AT1G10780 AT1G10780 CYCA1;1 CYCA1;1 EMB2795 EMB2795 AT3G14190 AT3G14190
"AT1G10780" - F-box/RNI-like protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G10780F-box/RNI-like protein (418 aa)    
Predicted Functional Partners:
AT4G39630
Uncharacterized protein (233 aa)
     
   
  0.782
AT5G48310
Uncharacterized protein (1156 aa)
     
   
  0.775
AT5G01910
Uncharacterized protein (180 aa)
     
   
  0.768
AT3G42660
Chromosome transmission fidelity protein 4 (953 aa)
     
   
  0.765
EMB2795
EMBRYO DEFECTIVE 2795; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases (By similarity). Essential protein (671 aa)
     
   
  0.742
CYCA1;1
Cyclin A1;1 (460 aa)
     
   
  0.741
AT3G14190
Uncharacterized protein (193 aa)
     
   
  0.723
TRM7
TON1 Recruiting Motif 7 (820 aa)
     
   
  0.703
POLA2
DNA polymerase alpha 2; May play an essential role at the early stage of chromosomal DNA replication by coupling the polymerase alpha/primase complex to the cellular replication machinery (620 aa)
     
   
  0.683
AT4G14200
Pentatricopeptide repeat (PPR) superfamily protein (784 aa)
     
   
  0.679
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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