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AT4G08450 AT4G08450 AT1G72860 AT1G72860 AT2G17050 AT2G17050 CYTC-2 CYTC-2 AT3G51360 AT3G51360 RPP8L1 RPP8L1 AT3G04210 AT3G04210 CYTC-1 CYTC-1 AT1G72910 AT1G72910 AT1G72920 AT1G72920 AT1G72900 AT1G72900
"RPP8L1" - LOCUS ORCHESTRATING VICTORIN EFFECTS1 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPP8L1LOCUS ORCHESTRATING VICTORIN EFFECTS1 (727 aa)    
Predicted Functional Partners:
AT3G51360
Aspartyl protease family protein (488 aa)
           
  0.806
AT1G72860
TIR-NBS-LRR class disease resistance protein (1163 aa)
           
  0.779
CYTC-2
Cytochrome c-2; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain (By similarity) (112 aa)
     
  0.745
CYTC-1
CYTOCHROME C-1; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain (By similarity) (114 aa)
     
  0.745
AT4G08450
TIR-NBS-LRR class disease resistance protein (1234 aa)
           
  0.739
AT2G17050
TIR-NBS-LRR class disease resistance protein (1355 aa)
           
  0.739
AT1G72920
Toll-Interleukin-Resistance domain-containing protein (275 aa)
           
  0.739
AT1G72910
Toll-Interleukin-Resistance domain-containing protein (380 aa)
     
   
  0.707
AT3G04210
TIR-NBS class disease resistance protein (531 aa)
           
  0.704
AT1G72900
Toll-Interleukin-Resistance domain-containing protein (363 aa)
     
   
  0.698
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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