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AT4G15930 AT4G15930 XIH XIH AT2G25450 AT2G25450 AT5G63080 AT5G63080 AT5G06550 AT5G06550 AT1G11780 AT1G11780 DES1 DES1 HOL1 HOL1 AT3G12050 AT3G12050 ALKBH2 ALKBH2 AT3G50880 AT3G50880
"AT1G11780" - Alpha-ketoglutarate-dependent dioxygenase alkB in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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AT1G11780Alpha-ketoglutarate-dependent dioxygenase alkB; Putative dioxygenase that may repair alkylated DNA or RNA by oxidative demethylation. Requires molecular oxygen, alpha- ketoglutarate and iron (By similarity) (345 aa)    
Predicted Functional Partners:
ALKBH2
Homolog of E. coli alkB; Dioxygenase that repairs alkylated DNA containing 1- methyladenine and 1-ethenoadenine by oxidative demethylation. Accepts double-stranded and single-stranded substrates, with a preference for dsDNA over ssDNA. Confers resistance to methylating agents such as methylmethanesulphonate (MMS) (314 aa)
           
  0.880
AT5G06550
Uncharacterized protein (502 aa)
     
   
  0.695
HOL1
HARMLESS TO OZONE LAYER 1; S-adenosyl-L-methionine-dependent methyltransferase. Involved in glucosinolate metabolism and defense against phytopathogens. Highly reactive to thiocyanate (NCS(-)) derived from myrosinase-mediated hydrolysis of glucosinolates upon tissue damage (246 aa)
           
  0.692
AT5G63080
Transcription factor jumonji (jmjC) domain-containing protein (462 aa)
           
  0.670
AT3G12050
Aha1 domain-containing protein (360 aa)
 
            0.639
AT2G25450
Putative 2-oxoacid dependent dioxygenase; Necessary for the hydroxylation of but-3-enyl glucosinolate to 2-hydroxybut-3-enyl glucosinolate, which is toxic to insects, bacteria and nematodes, inhibits seed germination and produces bitter flavors (359 aa)
     
   
  0.613
AT4G15930
Dynein light chain LC8-type (123 aa)
           
  0.603
DES1
Cysteine synthase A; Involved in maintaining Cys homeostasis through the desulfuration of L-cysteine. Modulates the generation of the signaling molecule sulfide in plant cytosol. Probably unable to interact with SAT and to form the decameric Cys synthase complex (CSC) and is therefore not an enzymatically true OASTL protein (323 aa)
           
  0.558
XIH
Member of Myosin-like proteins; Myosin heavy chain that is required for the cell cycle- regulated transport of various organelles and proteins for their segregation. Functions by binding with its tail domain to receptor proteins on organelles and exerting force with its N-terminal motor domain against actin filaments, thereby transporting its cargo along polarized actin cables (By similarity) (1516 aa)
           
  0.554
AT3G50880
DNA-3-methyladenine glycosylase II (273 aa)
   
   
  0.514
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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