Full Link:
STRINGSTRING
CYTC-1 CYTC-1 ORF113 ORF113 RAN4 RAN4 At5g47320 At5g47320 RFL1 RFL1 CYTC-2 CYTC-2 AT3G26560 AT3G26560 AT2G45910 AT2G45910 AT2G40860 AT2G40860 AT1G12190 AT1G12190 AT3G24530 AT3G24530
"RFL1" - RPS5-like 1 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RFL1RPS5-like 1; Disease resistance (R) protein (885 aa)    
Predicted Functional Partners:
AT1G12190
F-box and associated interaction domain-containing protein (375 aa)
           
  0.810
CYTC-2
Cytochrome c-2; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain (By similarity) (112 aa)
     
  0.745
CYTC-1
CYTOCHROME C-1; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain (By similarity) (114 aa)
     
  0.745
AT3G26560
ATP-dependent RNA helicase, putative; May be involved in pre-mRNA splicing (1168 aa)
       
 
  0.689
AT2G40860
Putative protein phosphatase 2C 31 (658 aa)
     
  0.687
AT3G24530
AAA-type ATPase family protein / ankyrin repeat family protein (481 aa)
       
 
  0.664
AT2G45910
U-box domain-containing protein 33; Functions as an E3 ubiquitin ligase (834 aa)
     
  0.643
At5g47320
Ribosomal protein S19; The RNA-binding domain found in RPS19 may functionally replaces the missing mitochondrial RPS13 (212 aa)
       
  0.639
RAN4
Ras-related nuclear protein 4; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (By similarity) (222 aa)
           
  0.638
ORF113
Hypothetical protein.[Source-TAIR;Acc-ATMG01220] (113 aa)
           
  0.636
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (2%)