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AT5G17850 AT5G17850 MEE14 MEE14 SAUR9 SAUR9 AT1G12890 AT1G12890 AT3G32920 AT3G32920 AT1G06730 AT1G06730 AT2G16660 AT2G16660 AT1G05030 AT1G05030 AT1G63730 AT1G63730 AT1G01260 AT1G01260 SRF6 SRF6
"AT1G12890" - Ethylene-responsive transcription factor ERF088 in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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AT1G12890Ethylene-responsive transcription factor ERF088; Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity) (219 aa)    
Predicted Functional Partners:
AT1G05030
Major facilitator superfamily protein; May be involved in the efflux of glucose towards the cytosol (524 aa)
           
  0.863
AT3G32920
P-loop containing nucleoside triphosphate hydrolase-like protein; Involved in recombination ability and DNA strand transfer activity (226 aa)
           
  0.861
AT2G16660
Putative nodulin protein (546 aa)
           
  0.810
AT1G06730
pfkB-type carbohydrate kinase-like protein (488 aa)
           
  0.808
AT1G63730
TIR-NBS-LRR class disease resistance protein (966 aa)
           
  0.801
AT5G17850
Sodium/calcium exchanger family protein; Membrane-localized H(+)-dependent K(+) and Na(+) transporter (559 aa)
     
   
  0.686
SRF6
STRUBBELIG-receptor family 6 (720 aa)
           
  0.670
AT1G01260
Transcription factor bHLH13 (590 aa)
           
  0.670
MEE14
Maternal effect embryo arrest 14; Required for the development of the one-cell zygote and endosperm in embryos (PubMed-15634699). Required for micropylar pollen tube guidance, but has no effect on ovule development and gametophytic cell fate specification. May connect transcription factors and the Pol II machinery to regulate pollen tube attraction, via its interactions with AGAMOUS-like (AGL) transcription factors, MEE14/CCG and the Mediator complex (PubMed-26462908) (203 aa)
           
  0.600
SAUR9
SMALL AUXIN UPREGULATED RNA 9 (104 aa)
           
  0.559
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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