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AT3G06040 AT3G06040 AT2G03130 AT2G03130 AT4G36420 AT4G36420 RPL12-B RPL12-B AT4G37660 AT4G37660 AT1G14220 AT1G14220 RPL12-C RPL12-C AT1G70190 AT1G70190 AT2G20420 AT2G20420 RPL12-A RPL12-A AT5G12040 AT5G12040
"AT1G14220" - Ribonuclease T2 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
AT1G14220Ribonuclease T2 (228 aa)    
Predicted Functional Partners:
AT2G20420
ATP citrate lyase (ACL) family protein (421 aa)
       
      0.525
AT4G37660
Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein (167 aa)
       
      0.491
AT4G36420
Ribosomal protein L12 family protein (179 aa)
       
      0.491
RPL12-C
Ribosomal protein L12-C (187 aa)
       
      0.491
RPL12-B
Ribosomal protein L12-B (193 aa)
       
      0.491
RPL12-A
Ribosomal protein L12-A (191 aa)
       
      0.491
AT3G06040
Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein (186 aa)
       
      0.491
AT2G03130
Large subunit ribosomal protein L7/L12 (110 aa)
       
      0.491
AT1G70190
Ribosomal protein L7/L12 domain-containing protein (208 aa)
       
      0.491
AT5G12040
Omega-amidase; Omega-amidase involved in the metabolism of asparagine. Probably also closely coupled with glutamine transamination in the methionine salvage cycle. Can use alpha-ketosuccinamate and alpha- hydroxysuccinamate as substrates, producing respectively oxaloacetate and malate, or alpha-ketoglutaramate, producing alpha-ketoglutarate (369 aa)
       
      0.468
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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